2021-02-03 16:02:58 +00:00
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- name: fastp single-end
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command: nextflow run ./tests/software/fastp -entry test_fastp_single_end -c ./tests/config/nextflow.config
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2021-02-01 13:02:06 +00:00
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tags:
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- fastp
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2021-02-03 16:02:58 +00:00
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- fastp_single_end
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2021-02-01 13:02:06 +00:00
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files:
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- path: ./output/fastp/test.fastp.json
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md5sum: b81d53bfa5c1553bed89f6475edcf437
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- path: ./output/fastp/test.trim.fastq.gz
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md5sum: 2f5516df477b123e3f78adb67effa3bc
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- path: ./output/fastp/test.fastp.log
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- path: ./output/fastp/test.fastp.html
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2021-02-03 16:02:58 +00:00
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- name: fastp paired-end
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command: nextflow run ./tests/software/fastp -entry test_fastp_paired_end -c ./tests/config/nextflow.config
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2021-02-01 13:02:06 +00:00
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tags:
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- fastp
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2021-02-03 16:02:58 +00:00
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- fastp_paired_end
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2021-02-01 13:02:06 +00:00
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files:
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- path: ./output/fastp/test.fastp.html
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- path: ./output/fastp/test.fastp.json
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md5sum: 40db7fcbed478b0a96a1c5c1bb5f737b
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- path: ./output/fastp/test.fastp.log
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- path: ./output/fastp/test_1.trim.fastq.gz
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md5sum: c8844c05194b50ae368e6825e997aa7f
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- path: ./output/fastp/test_2.trim.fastq.gz
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md5sum: 9238b07bb1609e939be7c8889b72c209
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