nf-core_modules/modules/deeptools/plotprofile/meta.yml

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name: deeptools_plotprofile
description: plots values produced by deeptools_computematrix as a profile plot
keywords:
- plot
- profile
- scores
- matrix
tools:
- deeptools:
description: A set of user-friendly tools for normalization and visualization of deep-sequencing data
homepage:
documentation: https://deeptools.readthedocs.io/en/develop/index.html
tool_dev_url: https://github.com/deeptools/deepTools
doi: "10.1093/nar/gku365"
licence: ['GPL v3']
input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test' ]
- matrix:
type: file
description: |
gzipped matrix file produced by deeptools_
computematrix deeptools utility
pattern: "*.{mat.gz}"
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- pdf:
type: file
description: |
Output figure containing resulting plot
pattern: "*.{plotProfile.pdf}"
- matrix:
type: file
description: |
File containing the matrix of values
used to generate the profile
pattern: "*.{plotProfile.mat.tab}"
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
authors:
- "@emiller88"
- "@drpatelh"
- "@joseespinosa"