nf-core_modules/tests/software/bismark/summary/test.yml

- name: Run bismark summary test workflow
  command: nextflow run ./tests/software/bismark/summary -entry test_bismark_summary -c tests/config/nextflow.config
  tags:
    - bismark
    - bismark_summary
  files:
    - path: output/bismark/bismark_summary_report.html
    - path: output/bismark/bismark_summary_report.txt
      md5sum: 06fc717e81b3f8f0d6e279d572f407f6
add bismark/summary (#295) * add bismark/align module * bismark/align: add tests * bismark/align: update meta.yml * bismark/align: skip checksum for alignment logs they contain timestamps * bismark/align: restore correct checksum caused some mixup in the last commit * bismark/align: add genome_preparation to filters * Fix conda version pin * change options to be a global var * remove params from meta.yml * add bismark/summary * remove md5sum check for bismark_summary_report.html it contains a timestamp * fix tests * update meta.yml * remove mysterious index files 2021-03-22 13:58:54 +00:00			`- name: Run bismark summary test workflow`
			`command: nextflow run ./tests/software/bismark/summary -entry test_bismark_summary -c tests/config/nextflow.config`
			`tags:`
			`- bismark`
			`- bismark_summary`
			`files:`
			`- path: output/bismark/bismark_summary_report.html`
			`- path: output/bismark/bismark_summary_report.txt`
			`md5sum: 06fc717e81b3f8f0d6e279d572f407f6`