2020-06-23 08:38:09 +00:00
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FROM nfcore/base:1.7
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2020-06-01 12:52:43 +00:00
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LABEL authors="chris.cheshire@crick.ac.uk" \
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2020-06-01 14:13:30 +00:00
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description="Docker image containing all requirements for the nf-core umi_tools module"
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2020-06-18 14:40:24 +00:00
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2020-06-01 12:52:43 +00:00
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# Install apt packages
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RUN apt-get update \
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&& apt-get install -y --no-install-recommends \
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procps=2:3.3.15-2 \
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&& apt-get clean \
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&& rm -rf /var/lib/apt/lists/*
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2020-06-18 14:40:24 +00:00
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2020-06-01 12:52:43 +00:00
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# Install conda packages
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COPY environment.yml /
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2020-06-18 15:54:14 +00:00
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RUN conda env create -f /environment.yml && conda clean -a
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2020-06-23 08:38:09 +00:00
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ENV PATH /opt/conda/envs/nfcore-module-umitools/bin:$PATH
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