mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 13:43:09 +00:00
39 lines
889 B
YAML
39 lines
889 B
YAML
|
name: biscuit_index
|
||
|
|
description: Indexes a reference genome for use with Biscuit
|
||
|
|
keywords:
|
||
|
|
- biscuit
|
||
|
|
- DNA methylation
|
||
|
|
- WGBS
|
||
|
|
- scWGBS
|
||
|
|
- bisulfite sequencing
|
||
|
|
- index
|
||
|
|
- reference
|
||
|
|
- fasta
|
||
|
|
|
||
|
|
tools:
|
||
|
|
- biscuit:
|
||
|
|
description: A utility for analyzing sodium bisulfite conversion-based DNA methylation/modification data
|
||
|
|
homepage: https://huishenlab.github.io/biscuit/
|
||
|
|
documentation: https://huishenlab.github.io/biscuit/docs/alignment
|
||
|
|
tool_dev_url: https://github.com/huishenlab/biscuit
|
||
|
|
doi: ""
|
||
|
|
licence: ["MIT"]
|
||
|
|
|
||
|
|
input:
|
||
|
|
- fasta:
|
||
|
|
type: file
|
||
|
|
description: Input genome fasta file
|
||
|
|
|
||
|
|
output:
|
||
|
|
- index:
|
||
|
|
type: dir
|
||
|
|
description: Biscuit genome index directory
|
||
|
|
pattern: "BiscuitIndex"
|
||
|
|
- versions:
|
||
|
|
type: file
|
||
|
|
description: File containing software versions
|
||
|
|
pattern: "versions.yml"
|
||
|
|
|
||
|
|
authors:
|
||
|
|
- "@njspix"
|