nf-core_modules/tests/modules/motus/merge/nextflow.config

process {

    publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }

    withName: MOTUS_MERGE_BIOM {
        ext.args = "-B"
    }
}
Add MOTUS/MERGE (#1734) * Add motus/merge module, missing test yml * Fix prefix * Fix polymersase * Update test meta.yml * Try new version system * Typo fix * Clairfy docs for the version file * Switch to directory auto detection * Now with the change and not just meta * Remove now unneeded input parameter from test * Fix input type check * Try adding db requirement to fix docker issue * Update modules/motus/merge/main.nf * Fix input * Apply suggestions from code review * Fix md5sums * Replace debugging db location with actual * Fix contains due to further varialbility * Indenting 2022-07-07 07:47:41 +00:00			`process {`

			`publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }`
Update MOTUS/MERGE (#2068) * Update main.nf * Update meta.yml * Re-add logos as not staged in a way that works with MultiQC config files * Add meta to mOTUs merge * Put tests back to use downloaded db * Apply suggestions from code review * Fix test text string * md5sum -> contains * Update nextflow.config 2022-09-15 17:45:43 +00:00
			`withName: MOTUS_MERGE_BIOM {`
			`ext.args = "-B"`
			`}`
			`}`