mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-15 14:13:09 +00:00
36 lines
1,006 B
Text
36 lines
1,006 B
Text
|
#!/usr/bin/env nextflow
|
||
|
|
|
||
|
|
nextflow.enable.dsl = 2
|
||
|
|
|
||
|
|
include { IDR } from '../../../modules/idr/main.nf' addParams( options: [:] )
|
||
|
|
|
||
|
|
workflow test_idr_narrowpeak {
|
||
|
|
|
||
|
|
input = [
|
||
|
|
file(params.test_data['homo_sapiens']['illumina']['test_narrowpeak'], checkIfExists: true),
|
||
|
|
file(params.test_data['homo_sapiens']['illumina']['test2_narrowpeak'], checkIfExists: true)
|
||
|
|
]
|
||
|
|
|
||
|
|
IDR ( input, 'narrowPeak', 'test' )
|
||
|
|
}
|
||
|
|
|
||
|
|
workflow test_idr_broadpeak {
|
||
|
|
|
||
|
|
input = [
|
||
|
|
file(params.test_data['homo_sapiens']['illumina']['test_broadpeak'], checkIfExists: true),
|
||
|
|
file(params.test_data['homo_sapiens']['illumina']['test2_broadpeak'], checkIfExists: true)
|
||
|
|
]
|
||
|
|
|
||
|
|
IDR ( input, 'broadPeak', 'test' )
|
||
|
|
}
|
||
|
|
|
||
|
|
workflow test_idr_noprefix {
|
||
|
|
|
||
|
|
input = [
|
||
|
|
file(params.test_data['homo_sapiens']['illumina']['test_narrowpeak'], checkIfExists: true),
|
||
|
|
file(params.test_data['homo_sapiens']['illumina']['test2_narrowpeak'], checkIfExists: true)
|
||
|
|
]
|
||
|
|
|
||
|
|
IDR ( input, 'narrowPeak', '' )
|
||
|
|
}
|