nf-core_modules/software/pycoqc/meta.yml

49 lines
1.2 KiB
YAML
Raw Normal View History

name: pycoqc
description: write your description here
keywords:
- qc
- quality control
- sequencing
- nanopore
tools:
- pycoqc:
description: PycoQC computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing data
homepage: https://github.com/tleonardi/pycoQC
documentation: https://tleonardi.github.io/pycoQC/
tool_dev_url: https://github.com/tleonardi/pycoQC
doi: "10.21105/joss.01236"
licence: ['GNU General Public v3 (GPL v3)']
input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- summary:
type: file
description: sequencing summary file
pattern: "*.{txt}"
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- html:
type: file
description: Results in HTML format
- json:
type: file
description: Results in JSON format
pattern: "*.{json}"
- version:
type: file
description: File containing software version
pattern: "*.{version.txt}"
authors:
- "@joseespinosa"
- "@drpatelh"