nf-core_modules/tests/software/fastp/test.yml

- name: fastp single-end
  command: nextflow run ./tests/software/fastp -entry test_fastp_single_end -c ./tests/config/nextflow.config
  tags:
    - fastp
    - fastp_single_end
  files:
    - path: ./output/fastp/test.fastp.json
      md5sum: b81d53bfa5c1553bed89f6475edcf437
    - path: ./output/fastp/test.trim.fastq.gz
      md5sum: 2f5516df477b123e3f78adb67effa3bc
    - path: ./output/fastp/test.fastp.log
    - path: ./output/fastp/test.fastp.html

- name: fastp paired-end
  command: nextflow run ./tests/software/fastp -entry test_fastp_paired_end -c ./tests/config/nextflow.config
  tags:
    - fastp
    - fastp_paired_end
  files:
    - path: ./output/fastp/test.fastp.html
    - path: ./output/fastp/test.fastp.json
      md5sum: 40db7fcbed478b0a96a1c5c1bb5f737b
    - path: ./output/fastp/test.fastp.log
    - path: ./output/fastp/test_1.trim.fastq.gz
      md5sum: c8844c05194b50ae368e6825e997aa7f
    - path: ./output/fastp/test_2.trim.fastq.gz
      md5sum: 9238b07bb1609e939be7c8889b72c209