nf-core_modules/modules/ngmaster/meta.yml

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name: ngmaster
description: Serotyping Neisseria gonorrhoeae assemblies
keywords:
- fasta
- Neisseria gonorrhoeae
- serotype
tools:
- ngmaster:
description: In silico multi-antigen sequence typing for Neisseria gonorrhoeae (NG-MAST)
homepage: https://github.com/MDU-PHL/ngmaster/blob/master/README.md
documentation: https://github.com/MDU-PHL/ngmaster/blob/master/README.md
tool_dev_url: https://github.com/MDU-PHL/ngmaster
doi: "10.1099/mgen.0.000076"
licence: ["GPL v3 only"]
input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- fasta:
type: file
description: FASTA assembly file
pattern: "*.{fasta,fasta.gz,fa,fa.gz,fna,fna.gz}"
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
- tsv:
type: file
description: Tab-delimited result file
pattern: "*.tsv"
authors:
- "@rpetit3"