mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-15 22:23:09 +00:00
22 lines
925 B
Text
22 lines
925 B
Text
|
#!/usr/bin/env nextflow
|
||
|
|
|
||
|
|
nextflow.enable.dsl = 2
|
||
|
|
|
||
|
|
include { EIDO_VALIDATE } from '../../../../modules/eido/validate/main.nf'
|
||
|
|
|
||
|
|
workflow test_eido_validate_on_nextflow_samplesheet {
|
||
|
|
|
||
|
|
samplesheet = file("https://github.com/nf-core/test-datasets/raw/modules/data/delete_me/pep/test_nextflow_original_samplesheet.csv", checkIfExists: true)
|
||
|
|
schema = file("https://github.com/nf-core/test-datasets/raw/modules/data/delete_me/pep/test_samplesheet_schema.yaml", checkIfExists: true)
|
||
|
|
|
||
|
|
EIDO_VALIDATE ( samplesheet, schema )
|
||
|
|
}
|
||
|
|
|
||
|
|
workflow test_eido_validate_on_pep_config {
|
||
|
|
|
||
|
|
samplesheet = file("https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/delete_me/pep/test_pep_format_files/config.yaml", checkIfExists: true)
|
||
|
|
schema = file("https://github.com/nf-core/test-datasets/raw/modules/data/delete_me/pep/test_samplesheet_schema.yaml", checkIfExists: true)
|
||
|
|
|
||
|
|
EIDO_VALIDATE ( samplesheet, schema )
|
||
|
|
}
|