2020-07-14 15:10:23 +00:00
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name: bwa-mem2 index
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description: create indexes for BWA from a fasta file
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keywords:
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- index
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tools:
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- bwa:
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description: |
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Bwa-mem2 is the next version of the bwa-mem algorithm in bwa.
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It produces alignment identical to bwa and is ~1.3-3.1x faster depending on the use-case, dataset and the running machine.
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homepage: https://github.com/bwa-mem2/bwa-mem2
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documentation: https://github.com/bwa-mem2/bwa-mem2
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arxiv: arXiv:1303.3997
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input:
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-
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- input:
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type: file
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description: Input fasta file
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pattern: *.{fasta,fa}
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output:
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-
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- index:
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type: file
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description: bwa indexes file
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pattern: *.{fasta,fa}.{amb,ann,bwt,pac,sa}
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authors:
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2020-07-14 15:19:12 +00:00
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- @maxulysse
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