nf-core_modules/deprecated/bwa/index/main.nf

process bwa_index {
    tag "$fasta"

    container 'quay.io/biocontainers/bwa:0.7.17--hed695b0_7'

    input:
        path fasta

    output:
        path "${fasta}.*"

    script:
    """
    bwa index ${fasta}
    """
}
add bwa index 2020-01-21 05:24:32 -05:00			`process bwa_index {`
Minor style improvents This commit provides a minor refactoring with som Nextflow code style improvments: - Replaces `.toGiga()` with `.giga` - Replaces `tag { foo }` with `tag "$foo"` - Move publishDir before input declarations. Directives should be before the first input. Tho this is not enforced, it may be in future versions. - Replaces input `file` with `path` - Remove unnecessary parentheses 2020-07-27 06:11:42 -04:00			`tag "$fasta"`
add bwa index 2020-01-21 05:24:32 -05:00
			`container 'quay.io/biocontainers/bwa:0.7.17--hed695b0_7'`

			`input:`
Minor style improvents This commit provides a minor refactoring with som Nextflow code style improvments: - Replaces `.toGiga()` with `.giga` - Replaces `tag { foo }` with `tag "$foo"` - Move publishDir before input declarations. Directives should be before the first input. Tho this is not enforced, it may be in future versions. - Replaces input `file` with `path` - Remove unnecessary parentheses 2020-07-27 06:11:42 -04:00			`path fasta`
add bwa index 2020-01-21 05:24:32 -05:00
			`output:`
Minor style improvents This commit provides a minor refactoring with som Nextflow code style improvments: - Replaces `.toGiga()` with `.giga` - Replaces `tag { foo }` with `tag "$foo"` - Move publishDir before input declarations. Directives should be before the first input. Tho this is not enforced, it may be in future versions. - Replaces input `file` with `path` - Remove unnecessary parentheses 2020-07-27 06:11:42 -04:00			`path "${fasta}.*"`
add bwa index 2020-01-21 05:24:32 -05:00
			`script:`
			`"""`
			`bwa index ${fasta}`
			`"""`
Fix editor config styles 2020-07-11 07:42:13 -04:00			`}`