nf-core_modules/tests/modules/genmap/mappability/test.yml

- name: genmap mappability test_genmap_map
  command: nextflow run tests/modules/genmap/mappability -entry test_genmap_map -c tests/config/nextflow.config
  tags:
    - genmap
    - genmap/mappability
  files:
    - path: output/genmap/mappability.bedgraph
      md5sum: c4203b84a84331282ef8660279f80b26
    - path: output/genmap/mappability.txt
      md5sum: 602d409493457f92b2e5f075f62ebe30
    - path: output/genmap/mappability.wig
      md5sum: fd2afb6512ab9e86f9a3b62f8b9d9088
add genmap/mappability (#509) * add genmap/mappability * Add index module. Remove -w parameter from mappability module. * change the output of genmap/index * fix the lint error which can not handle stageAs. * Apply suggestions from code review * Update main.nf * Update test.yml * Update main.nf * Update test.yml * Update tests/software/genmap/mappability/main.nf * Update software/genmap/mappability/main.nf * Update software/genmap/mappability/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-05-25 21:12:10 +00:00			`- name: genmap mappability test_genmap_map`
Rename software/ directory to modules/ to re-organise module structure (#567) * Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml 2021-07-07 09:10:18 +00:00			`command: nextflow run tests/modules/genmap/mappability -entry test_genmap_map -c tests/config/nextflow.config`
add genmap/mappability (#509) * add genmap/mappability * Add index module. Remove -w parameter from mappability module. * change the output of genmap/index * fix the lint error which can not handle stageAs. * Apply suggestions from code review * Update main.nf * Update test.yml * Update main.nf * Update test.yml * Update tests/software/genmap/mappability/main.nf * Update software/genmap/mappability/main.nf * Update software/genmap/mappability/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-05-25 21:12:10 +00:00			`tags:`
			`- genmap`
			`- genmap/mappability`
			`files:`
			`- path: output/genmap/mappability.bedgraph`
			`md5sum: c4203b84a84331282ef8660279f80b26`
			`- path: output/genmap/mappability.txt`
			`md5sum: 602d409493457f92b2e5f075f62ebe30`
			`- path: output/genmap/mappability.wig`
			`md5sum: fd2afb6512ab9e86f9a3b62f8b9d9088`