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19 lines
487 B
Text
19 lines
487 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { SVDB_QUERY } from '../../../../modules/svdb/query/main.nf'
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workflow test_svdb_query {
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input = [ [ id:'test' ], // meta map
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[ file(params.test_data['homo_sapiens']['illumina']['test_sv_vcf'], checkIfExists: true) ]
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]
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vcf_db = [
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file(params.test_data['homo_sapiens']['genome']['gnomad_r2_1_1_sv_vcf_gz'], checkIfExists: true)
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]
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SVDB_QUERY ( input, vcf_db )
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}
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