nf-core_modules/tests/modules/ensemblvep/test.yml

- name: ensemblvep test_ensemblvep
  command: nextflow run tests/modules/ensemblvep -entry test_ensemblvep -c tests/config/nextflow.config
  tags:
    - ensemblvep
  files:
    - path: output/ensemblvep/test.ann.vcf
    - path: output/ensemblvep/test.summary.html
feat: add VEP module (#547) * feat: add VEP module * fix: name * fix: EC lint] * feat: add info about params * fix: params as params, not input * fix: improve script * Update software/ensemblvep/environment.yml Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * Apply suggestions from code review * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-07-06 12:11:11 +00:00			`- name: ensemblvep test_ensemblvep`
Rename software/ directory to modules/ to re-organise module structure (#567) * Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml 2021-07-07 09:10:18 +00:00			`command: nextflow run tests/modules/ensemblvep -entry test_ensemblvep -c tests/config/nextflow.config`
feat: add VEP module (#547) * feat: add VEP module * fix: name * fix: EC lint] * feat: add info about params * fix: params as params, not input * fix: improve script * Update software/ensemblvep/environment.yml Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> * Apply suggestions from code review * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-07-06 12:11:11 +00:00			`tags:`
			`- ensemblvep`
			`files:`
			`- path: output/ensemblvep/test.ann.vcf`
			`- path: output/ensemblvep/test.summary.html`