millironx/nf-core_modules
1
0
Fork 0
mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-11-11 04:33:10 +00:00
Code Issues Releases Packages Activity
nf-core_modules/tests/modules/genmap/index/test.yml

49 lines
2.1 KiB
YAML
Raw Normal View History

add genmap/mappability (#509) * add genmap/mappability * Add index module. Remove -w parameter from mappability module. * change the output of genmap/index * fix the lint error which can not handle stageAs. * Apply suggestions from code review * Update main.nf * Update test.yml * Update main.nf * Update test.yml * Update tests/software/genmap/mappability/main.nf * Update software/genmap/mappability/main.nf * Update software/genmap/mappability/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-05-25 21:12:10 +00:00
- name: genmap index test_genmap_index
Rename software/ directory to modules/ to re-organise module structure (#567) * Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
2021-07-07 09:10:18 +00:00
command: nextflow run tests/modules/genmap/index -entry test_genmap_index -c tests/config/nextflow.config
add genmap/mappability (#509) * add genmap/mappability * Add index module. Remove -w parameter from mappability module. * change the output of genmap/index * fix the lint error which can not handle stageAs. * Apply suggestions from code review * Update main.nf * Update test.yml * Update main.nf * Update test.yml * Update tests/software/genmap/mappability/main.nf * Update software/genmap/mappability/main.nf * Update software/genmap/mappability/main.nf Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-05-25 21:12:10 +00:00
tags:
- genmap
- genmap/index
files:
- path: output/index/genmap/index.ids.concat
md5sum: da6caa25f62c5407ccdfbcce1fa92408
- path: output/index/genmap/index.ids.limits
md5sum: f82636c5da188aec131d3a809473eff1
- path: output/index/genmap/index.info.concat
md5sum: 8ba5273aa9e58722bf45b9cc39fc6bfe
- path: output/index/genmap/index.info.limits
md5sum: 3522f2811f4ddf04598809fc84a1459e
- path: output/index/genmap/index.lf.drp
md5sum: dd85d6a23af2c7adf2695658e3056c08
- path: output/index/genmap/index.lf.drp.sbl
md5sum: f1d3ff8443297732862df21dc4e57262
- path: output/index/genmap/index.lf.drs
md5sum: 93b885adfe0da089cdf634904fd59f71
- path: output/index/genmap/index.lf.drv
md5sum: e06b605496bd91b32afa3c4f56d934ac
- path: output/index/genmap/index.lf.drv.sbl
md5sum: 8dd6bb7329a71449b0a1b292b5999164
- path: output/index/genmap/index.lf.pst
md5sum: e8daba34298e99e42942435286f9b3f0
- path: output/index/genmap/index.rev.lf.drp
md5sum: 5d9107e3aeec0721553dd661d4365fef
- path: output/index/genmap/index.rev.lf.drp.sbl
md5sum: f1d3ff8443297732862df21dc4e57262
- path: output/index/genmap/index.rev.lf.drs
md5sum: 93b885adfe0da089cdf634904fd59f71
- path: output/index/genmap/index.rev.lf.drv
md5sum: df7e795edc0a034577a9d2599fe8cfeb
- path: output/index/genmap/index.rev.lf.drv.sbl
md5sum: 8dd6bb7329a71449b0a1b292b5999164
- path: output/index/genmap/index.rev.lf.pst
md5sum: e8daba34298e99e42942435286f9b3f0
- path: output/index/genmap/index.sa.ind
md5sum: e21e5c7ce887cc8e3d0fa44ab1019cab
- path: output/index/genmap/index.sa.len
md5sum: 5dfc20cfe8ed9892451461a8d402f51c
- path: output/index/genmap/index.sa.val
md5sum: 400ee7f2fe93b2000ae3a5da5e509730
- path: output/index/genmap/index.txt.concat
md5sum: b4303962e0c176107945f3405370e6ae
- path: output/index/genmap/index.txt.limits
md5sum: 4480a068db603e4c9a27bc4fa9ceaf14
Reference in a new issue Copy permalink