nf-core_modules/modules/artic/guppyplex/meta.yml

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name: artic_guppyplex
description: Aggregates fastq files with demultiplexed reads
keywords:
- artic
- aggregate
- demultiplexed reads
tools:
- artic:
description: ARTIC pipeline - a bioinformatics pipeline for working with virus sequencing data sequenced with nanopore
homepage: https://artic.readthedocs.io/en/latest/
documentation: https://artic.readthedocs.io/en/latest/
tool_dev_url: https://github.com/artic-network/fieldbioinformatics
doi: ""
licence: ['MIT']
input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- fastq_dir:
type: directory
description: Directory containing the fastq files with demultiplexed reads
pattern: "*"
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- fastq:
type: file
description: Aggregated FastQ files
pattern: "*.{fastq.gz}"
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
authors:
- "@joseespinosa"
- "@drpatelh"