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20 lines
615 B
Text
20 lines
615 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { VCFANNO } from '../../../modules/vcfanno/main.nf'
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workflow test_vcfanno {
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input = [
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[ id:'test', single_end:false ], // meta map
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file(params.test_data['sarscov2']['illumina']['test_vcf_gz'], checkIfExists: true),
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file(params.test_data['sarscov2']['illumina']['test_vcf_gz_tbi'], checkIfExists: true)
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]
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toml = file("https://raw.githubusercontent.com/nf-core/test-datasets/8fbd9f99a2feb3f9e39cd3bcdc4a9176a5835673/data/delete_me/vcfanno.toml",
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checkIfExists: true)
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VCFANNO ( input, toml )
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}
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