nf-core_modules/modules/krakentools/kreport2krona/meta.yml

42 lines
1.1 KiB
YAML
Raw Normal View History

name: krakentools_kreport2krona
description: Takes a Kraken report file and prints out a krona-compatible TEXT file
keywords:
- kraken
- krona
- metagenomics
- visualization
tools:
- krakentools:
description: KrakenTools is a suite of scripts to be used for post-analysis of Kraken/KrakenUniq/Kraken2/Bracken results. Please cite the relevant paper if using KrakenTools with any of the listed programs.
homepage: https://github.com/jenniferlu717/KrakenTools
licence: ["GPL v3"]
input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- kreport:
type: file
description: Kraken report
pattern: "*.{txt,kreport}"
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
- krona:
type: file
description: Krona text-based input file converted from Kraken report
pattern: "*.{txt,krona}"
authors:
- "@MillironX"