mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 13:43:09 +00:00
24 lines
707 B
Text
24 lines
707 B
Text
|
#!/usr/bin/env nextflow
|
||
|
|
|
||
|
|
nextflow.enable.dsl = 2
|
||
|
|
|
||
|
|
include { LAST_DOTPLOT } from '../../../../software/last/dotplot/main.nf' addParams( options: [:] )
|
||
|
|
|
||
|
|
workflow test_last_dotplot {
|
||
|
|
|
||
|
|
input = [ [ id:'test' ], // meta map
|
||
|
|
file(params.test_data['sarscov2']['genome']['contigs_genome_maf_gz'], checkIfExists: true) ]
|
||
|
|
|
||
|
|
LAST_DOTPLOT ( input )
|
||
|
|
}
|
||
|
|
|
||
|
|
include { LAST_DOTPLOT as LAST_DOTPLOT_GIF } from '../../../../software/last/dotplot/main.nf' addParams( options: [args2:'gif'] )
|
||
|
|
|
||
|
|
workflow test_last_dotplot_gif {
|
||
|
|
|
||
|
|
input = [ [ id:'test' ], // meta map
|
||
|
|
file(params.test_data['sarscov2']['genome']['contigs_genome_maf_gz'], checkIfExists: true) ]
|
||
|
|
|
||
|
|
LAST_DOTPLOT_GIF ( input )
|
||
|
|
}
|