nf-core_modules/tests/software/hmmer/hmmalign/main.nf

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#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
include { HMMER_HMMALIGN } from '../../../../software/hmmer/hmmalign/main.nf' addParams( options: [:] )
workflow test_hmmer_hmmalign {
input = [
[ id:'test' ], // meta map
file('https://raw.githubusercontent.com/erikrikarddaniel/test-datasets/modules/data/delete_me/e_coli_k12_16s.fna') // Change to params.test_data syntax after the data is included in tests/config/test_data.config
]
hmm = file('https://raw.githubusercontent.com/erikrikarddaniel/test-datasets/modules/data/delete_me/bac.16S_rRNA.hmm')
HMMER_HMMALIGN ( input, hmm )
}