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19 lines
536 B
Text
19 lines
536 B
Text
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#!/usr/bin/env nextflow
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nextflow.preview.dsl = 2
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params.bedtools_merge_args = '' //''-s -c 6 -o distinct'
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include check_output from '../../../../tests/functions/check_process_outputs.nf' // params(params)
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include BEDTOOLS_MERGE from '../main.nf' params(params)
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// Define input channels
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ch_input = Channel.fromPath('../../test_data_set/A.bed')
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//ch_input = Channel.fromPath('./input_data/JK2067_downsampled_s0.1.bam')
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// Run the workflow
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workflow {
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BEDTOOLS_MERGE(ch_input, params.bedtools_merge_args)
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// .check_output()
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}
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