nf-core_modules/modules/mafft/meta.yml

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name: mafft
description: Multiple sequence alignment using MAFFT
keywords:
- msa
- multiple sequence alignment
tools:
- mafft:
description: Multiple alignment program for amino acid or nucleotide sequences based on fast Fourier transform
homepage: https://mafft.cbrc.jp/alignment/software/
documentation: https://mafft.cbrc.jp/alignment/software/manual/manual.html
tool_dev_url: https://mafft.cbrc.jp/alignment/software/source.html
doi: "10.1093/nar/gkf436"
licence: ["BSD"]
input:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- fasta:
type: file
description: FASTA file containing the sequences to align
pattern: "*.{fa,fasta}"
output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
- fas:
type: file
description: Aligned sequences in FASTA format
pattern: "*.{fas}"
authors:
- "@MillironX"