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20 lines
487 B
Text
20 lines
487 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { PBCCS } from '../../../modules/pbccs/main.nf' addParams( options: [args:'--min-rq 0.9'] )
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workflow test_pbccs {
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input = [
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[ id:'test' ], // meta map
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file(params.test_data['homo_sapiens']['pacbio']['alz'], checkIfExists: true),
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file(params.test_data['homo_sapiens']['pacbio']['alzpbi'], checkIfExists: true)
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]
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chunk_num = 2
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chunk_on = 3
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PBCCS ( input, chunk_num, chunk_on )
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}
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