mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-12-22 19:18:17 +00:00
19 lines
498 B
Text
19 lines
498 B
Text
|
#!/usr/bin/env nextflow
|
||
|
|
|
||
|
|
nextflow.enable.dsl = 2
|
||
|
|
|
||
|
|
include { PBBAM_PBMERGE } from '../../../../modules/pbbam/pbmerge/main.nf' addParams( options: [suffix: '.merged'] )
|
||
|
|
|
||
|
|
workflow test_pbbam_pbmerge {
|
||
|
|
|
||
|
|
input = [
|
||
|
|
[ id:'test' ], // meta map
|
||
|
|
[
|
||
|
|
file(params.test_data['homo_sapiens']['pacbio']['cluster'] , checkIfExists: true),
|
||
|
|
file(params.test_data['homo_sapiens']['pacbio']['singletons'], checkIfExists: true)
|
||
|
|
]
|
||
|
|
]
|
||
|
|
|
||
|
|
PBBAM_PBMERGE ( input )
|
||
|
|
}
|