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13 lines
246 B
Text
13 lines
246 B
Text
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process {
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publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
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withName:SAMTOOLS_BAMTOCRAM{
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ext.args = "-C"
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}
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withName:SAMTOOLS_CRAMTOBAM{
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ext.args = "-b"
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}
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}
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