nf-core_modules/tests/modules/stringtie/merge/test.yml

- name: stringtie forward-strand merge
  command: nextflow run ./tests/modules/stringtie/merge/ -entry test_stringtie_forward_merge -c tests/config/nextflow.config
  tags:
    - stringtie
    - stringtie/merge
  files:
    - path: ./output/test_stringtie_forward_merge/stringtie.merged.gtf
      md5sum: 676aa20a2d7a3db18136cdc7ba183099

- name: stringtie reverse-strand merge
  command: nextflow run ./tests/modules/stringtie/merge/ -entry test_stringtie_reverse_merge -c tests/config/nextflow.config
  tags:
    - stringtie
    - stringtie/merge
  files:
    - path: ./output/test_stringtie_reverse_merge/stringtie.merged.gtf
      md5sum: 67e5102722ecaeea1fb44d1ec0953474
Add stringtie merge module (from nanoseq modules) (#475) * add stringtie merge module * add md5sum and path for stringtie.merged.gtf * fix errors * try fixing stringtie check error * add tag * remove unreproducible md5sum * address PR suggestions * hopefully fix linting error 2021-05-03 05:18:51 +00:00			`- name: stringtie forward-strand merge`
Rename software/ directory to modules/ to re-organise module structure (#567) * Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml 2021-07-07 09:10:18 +00:00			`command: nextflow run ./tests/modules/stringtie/merge/ -entry test_stringtie_forward_merge -c tests/config/nextflow.config`
Add stringtie merge module (from nanoseq modules) (#475) * add stringtie merge module * add md5sum and path for stringtie.merged.gtf * fix errors * try fixing stringtie check error * add tag * remove unreproducible md5sum * address PR suggestions * hopefully fix linting error 2021-05-03 05:18:51 +00:00			`tags:`
			`- stringtie`
			`- stringtie/merge`
			`files:`
			`- path: ./output/test_stringtie_forward_merge/stringtie.merged.gtf`
			`md5sum: 676aa20a2d7a3db18136cdc7ba183099`

			`- name: stringtie reverse-strand merge`
Rename software/ directory to modules/ to re-organise module structure (#567) * Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml 2021-07-07 09:10:18 +00:00			`command: nextflow run ./tests/modules/stringtie/merge/ -entry test_stringtie_reverse_merge -c tests/config/nextflow.config`
Add stringtie merge module (from nanoseq modules) (#475) * add stringtie merge module * add md5sum and path for stringtie.merged.gtf * fix errors * try fixing stringtie check error * add tag * remove unreproducible md5sum * address PR suggestions * hopefully fix linting error 2021-05-03 05:18:51 +00:00			`tags:`
			`- stringtie`
			`- stringtie/merge`
			`files:`
			`- path: ./output/test_stringtie_reverse_merge/stringtie.merged.gtf`
			`md5sum: 67e5102722ecaeea1fb44d1ec0953474`