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23 lines
696 B
Text
23 lines
696 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { EIDO_CONVERT } from '../../../../modules/eido/convert/main.nf'
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workflow test_eido_convert_nextflow_samplesheet {
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nextflow_samplesheet = file("https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/delete_me/pep/test_nextflow_original_samplesheet.csv", checkIfExists: true)
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format = "csv"
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EIDO_CONVERT ( nextflow_samplesheet, format )
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}
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workflow test_eido_convert_pep_project {
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pep_project = file("https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/delete_me/pep/test_pep_format_files/config.yaml", checkIfExists: true)
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format = "csv"
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EIDO_CONVERT ( pep_project, format )
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}
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