mirror of
https://github.com/MillironX/nf-core_modules.git
synced 2024-11-14 05:43:08 +00:00
49 lines
1.2 KiB
YAML
49 lines
1.2 KiB
YAML
|
name: pycoqc
|
||
|
|
description: write your description here
|
||
|
|
keywords:
|
||
|
|
- qc
|
||
|
|
- quality control
|
||
|
|
- sequencing
|
||
|
|
- nanopore
|
||
|
|
tools:
|
||
|
|
- pycoqc:
|
||
|
|
description: PycoQC computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing data
|
||
|
|
homepage: https://github.com/tleonardi/pycoQC
|
||
|
|
documentation: https://tleonardi.github.io/pycoQC/
|
||
|
|
tool_dev_url: https://github.com/tleonardi/pycoQC
|
||
|
|
doi: "10.21105/joss.01236"
|
||
|
|
licence: ['GNU General Public v3 (GPL v3)']
|
||
|
|
|
||
|
|
input:
|
||
|
|
- meta:
|
||
|
|
type: map
|
||
|
|
description: |
|
||
|
|
Groovy Map containing sample information
|
||
|
|
e.g. [ id:'test', single_end:false ]
|
||
|
|
- summary:
|
||
|
|
type: file
|
||
|
|
description: sequencing summary file
|
||
|
|
pattern: "*.{txt}"
|
||
|
|
|
||
|
|
output:
|
||
|
|
- meta:
|
||
|
|
type: map
|
||
|
|
description: |
|
||
|
|
Groovy Map containing sample information
|
||
|
|
e.g. [ id:'test', single_end:false ]
|
||
|
|
- html:
|
||
|
|
type: file
|
||
|
|
description: Results in HTML format
|
||
|
|
- json:
|
||
|
|
type: file
|
||
|
|
description: Results in JSON format
|
||
|
|
pattern: "*.{json}"
|
||
|
|
- version:
|
||
|
|
type: file
|
||
|
|
description: File containing software version
|
||
|
|
pattern: "*.{version.txt}"
|
||
|
|
|
||
|
|
authors:
|
||
|
|
- "@joseespinosa"
|
||
|
|
- "@drpatelh"
|