nf-core_modules/tests/modules/samtools/flagstat/test.yml

- name: samtools flagstat test_samtools_flagstat
  command: nextflow run ./tests/modules/samtools/flagstat -entry test_samtools_flagstat -c ./tests/config/nextflow.config  -c ./tests/modules/samtools/flagstat/nextflow.config
  tags:
    - samtools/flagstat
    - samtools
  files:
    - path: output/samtools/test.flagstat
      md5sum: 4f7ffd1e6a5e85524d443209ac97d783
samtools/stats: use prefix for outputs (#1788) * use prefix in flagstat * use prefix in idxstats * use prefix in stats * update test.yml 2022-06-16 11:42:01 +00:00			`- name: samtools flagstat test_samtools_flagstat`
			`command: nextflow run ./tests/modules/samtools/flagstat -entry test_samtools_flagstat -c ./tests/config/nextflow.config -c ./tests/modules/samtools/flagstat/nextflow.config`
Restructure tests to run individually for each module 2021-02-03 16:02:58 +00:00			`tags:`
Lint modules ci (#389) * ci: Add modules lint step Moved it ahead of the nextflow install so ideally it'll fail before we bother doing any more setup * ci: _ => / * Update tests/config/pytest_software.yml Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-04-08 08:10:52 +00:00			`- samtools/flagstat`
Fix/samtools flagstat (#1979) * fix samtools stats thread usage * flagstat: fix threads 2022-08-29 11:11:58 +00:00			`- samtools`
Restructure tests to run individually for each module 2021-02-03 16:02:58 +00:00			`files:`
samtools/stats: use prefix for outputs (#1788) * use prefix in flagstat * use prefix in idxstats * use prefix in stats * update test.yml 2022-06-16 11:42:01 +00:00			`- path: output/samtools/test.flagstat`
nf-core modules bump-versions for all modules (#630) * Add blacklist of modules that shouldn't be updated to .nf-core.yml * nf-core modules bump-versions for all modules * Remove TODO statements identified by linting * Fix md5sums for failing tests * Fix more tests 2021-07-28 08:10:44 +00:00			`md5sum: 4f7ffd1e6a5e85524d443209ac97d783`