nf-core_modules/tests/modules/freebayes/test.yml

- name: freebayes test_freebayes
  command: nextflow run tests/modules/freebayes -entry test_freebayes -c tests/config/nextflow.config
  tags:
    - freebayes
  files:
    - path: output/freebayes/test.vcf.gz

- name: freebayes test_freebayes_bed
  command: nextflow run tests/modules/freebayes -entry test_freebayes_bed -c tests/config/nextflow.config
  tags:
    - freebayes
  files:
    - path: output/freebayes/test.vcf.gz
New module: freebayes (#818) * add pydamage module Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> 2021-10-20 13:19:31 +00:00			`- name: freebayes test_freebayes`
			`command: nextflow run tests/modules/freebayes -entry test_freebayes -c tests/config/nextflow.config`
			`tags:`
			`- freebayes`
			`files:`
			`- path: output/freebayes/test.vcf.gz`

			`- name: freebayes test_freebayes_bed`
			`command: nextflow run tests/modules/freebayes -entry test_freebayes_bed -c tests/config/nextflow.config`
			`tags:`
			`- freebayes`
			`files:`
			`- path: output/freebayes/test.vcf.gz`
Check only for file being generated (#879) 2021-10-21 09:32:05 +00:00