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17 lines
658 B
Text
17 lines
658 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { PIRATE } from '../../../modules/pirate/main.nf' addParams( options: [:] )
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workflow test_pirate {
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input = [ [ id:'test', single_end:false ], // meta map
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[ file("https://github.com/bactopia/bactopia-tests/raw/main/data/reference/gff/GCF_000292685.gff", checkIfExists: true),
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file("https://github.com/bactopia/bactopia-tests/raw/main/data/reference/gff/GCF_000298385.gff", checkIfExists: true),
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file("https://github.com/bactopia/bactopia-tests/raw/main/data/reference/gff/GCF_002849995.gff", checkIfExists: true) ]
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]
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PIRATE ( input )
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}
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