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nf-core_modules/tests/modules/nextclade/test.yml

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Add Nextclade module (#484) * Bump pangolin version * Add nextclade to software list * Add nextclade module * Update md5sum for Pangolin due to version bump * Adding some URL to meta.yml * Adding new line at end of file Co-authored-by: JoseEspinosa <kadomu@gmail.com>
2021-05-06 14:48:15 +00:00
- name: nextclade test_nextclade_json
Rename software/ directory to modules/ to re-organise module structure (#567) * Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
2021-07-07 09:10:18 +00:00
command: nextflow run tests/modules/nextclade -entry test_nextclade_json -c tests/config/nextflow.config
Add Nextclade module (#484) * Bump pangolin version * Add nextclade to software list * Add nextclade module * Update md5sum for Pangolin due to version bump * Adding some URL to meta.yml * Adding new line at end of file Co-authored-by: JoseEspinosa <kadomu@gmail.com>
2021-05-06 14:48:15 +00:00
tags:
- nextclade
files:
- path: output/nextclade/test.json
md5sum: cab92830c5cb66076e7d6c054ea98362
- name: nextclade test_nextclade_csv
Rename software/ directory to modules/ to re-organise module structure (#567) * Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
2021-07-07 09:10:18 +00:00
command: nextflow run tests/modules/nextclade -entry test_nextclade_csv -c tests/config/nextflow.config
Add Nextclade module (#484) * Bump pangolin version * Add nextclade to software list * Add nextclade module * Update md5sum for Pangolin due to version bump * Adding some URL to meta.yml * Adding new line at end of file Co-authored-by: JoseEspinosa <kadomu@gmail.com>
2021-05-06 14:48:15 +00:00
tags:
- nextclade
files:
- path: output/nextclade/test.csv
md5sum: 4f7096df9be51f99a0d62a38653b29cf
- name: nextclade test_nextclade_tsv
Rename software/ directory to modules/ to re-organise module structure (#567) * Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
2021-07-07 09:10:18 +00:00
command: nextflow run tests/modules/nextclade -entry test_nextclade_tsv -c tests/config/nextflow.config
Add Nextclade module (#484) * Bump pangolin version * Add nextclade to software list * Add nextclade module * Update md5sum for Pangolin due to version bump * Adding some URL to meta.yml * Adding new line at end of file Co-authored-by: JoseEspinosa <kadomu@gmail.com>
2021-05-06 14:48:15 +00:00
tags:
- nextclade
files:
- path: output/nextclade/test.tsv
md5sum: fe07dc4ffcd81742ca9bef93f88e8836
- name: nextclade test_nextclade_tree
Rename software/ directory to modules/ to re-organise module structure (#567) * Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml
2021-07-07 09:10:18 +00:00
command: nextflow run tests/modules/nextclade -entry test_nextclade_tree -c tests/config/nextflow.config
Add Nextclade module (#484) * Bump pangolin version * Add nextclade to software list * Add nextclade module * Update md5sum for Pangolin due to version bump * Adding some URL to meta.yml * Adding new line at end of file Co-authored-by: JoseEspinosa <kadomu@gmail.com>
2021-05-06 14:48:15 +00:00
tags:
- nextclade
files:
- path: output/nextclade/test.tree.json
Bump new nextclade version (0.14.4) (#532)
2021-06-09 13:12:21 +00:00
md5sum: 5c57dd724bc2b5cfde8f42a17ff2865a
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