2021-01-29 00:41:49 +00:00
|
|
|
#!/usr/bin/env nextflow
|
|
|
|
|
|
|
|
nextflow.enable.dsl = 2
|
|
|
|
|
2021-02-08 22:25:13 +00:00
|
|
|
include { BEDTOOLS_COMPLEMENT } from '../../../../software/bedtools/complement/main.nf' addParams( options: [:] )
|
2021-01-29 00:41:49 +00:00
|
|
|
|
|
|
|
workflow test_bedtools_complement {
|
|
|
|
def input = []
|
|
|
|
input = [ [ id:'test'],
|
2021-02-07 21:31:02 +00:00
|
|
|
file("${launchDir}/tests/data/bed/A.bed", checkIfExists: true) ]
|
2021-01-29 00:41:49 +00:00
|
|
|
|
2021-02-07 21:31:02 +00:00
|
|
|
BEDTOOLS_COMPLEMENT ( input, file("${launchDir}/tests/data/bed/genome.sizes", checkIfExists: true) )
|
2021-01-29 00:41:49 +00:00
|
|
|
}
|