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15 lines
441 B
Text
15 lines
441 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { BISMARK_DEDUPLICATE } from '../../../../software/bismark/deduplicate/main.nf' addParams( options: [:] )
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workflow test_bismark_deduplicate {
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def input = []
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input = [ [ id:'test', single_end:false ], // meta map
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[ file("${launchDir}/tests/data/bismark/Ecoli_10K_methylated_R1_bismark_bt2_pe.bam", checkIfExists: true) ] ]
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BISMARK_DEDUPLICATE ( input )
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}
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