nf-core_modules/tests/software/gatk4/revertsam/main.nf

15 lines
374 B
Text
Raw Normal View History

#!/usr/bin/env nextflow
nextflow.enable.dsl = 2
2021-02-22 14:21:39 +00:00
include { GATK4_REVERTSAM } from '../../../../software/gatk4/revertsam/main.nf' addParams( options: [:] )
2021-02-22 14:21:39 +00:00
workflow test_gatk4_revertsam {
def input = []
input = [ [ id:'test' ], // meta map
2021-02-22 14:21:39 +00:00
file("${launchDir}/tests/data/bam/sarscov2_aln.bam", checkIfExists: true) ]
2021-02-22 14:21:39 +00:00
GATK4_REVERTSAM( input )
}