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17 lines
472 B
Text
17 lines
472 B
Text
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#!/usr/bin/env nextflow
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nextflow.enable.dsl = 2
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include { QUALIMAP_BAMQC } from '../../../../software/qualimap/bamqc/main.nf' addParams( options: [:] )
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workflow test_qualimap_bamqc {
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def input = []
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input = [ [ id:'test', single_end:false ], // meta map
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file("${launchDir}/tests/data/bam/test.paired_end.sorted.bam", checkIfExists: true) ]
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def gff = file("dummy_file.txt")
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def use_gff = false
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QUALIMAP_BAMQC ( input, gff, use_gff )
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}
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