nf-core_modules/tests/software/raxmlng/test.yml

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- name: raxmlng no_bootstrap
command: nextflow run ./tests/software/raxmlng -entry test_raxmlng_no_bootstrap -c tests/config/nextflow.config
tags:
- raxmlng
files:
- path: output/raxmlng/output.raxml.bestTree
contains:
- 'sample1:0.359'
- 'sample2:1.50'
- 'sample3:0.000001'
- 'sample4:0.111'
- name: raxmlng bootstrap
command: nextflow run ./tests/software/raxmlng -entry test_raxmlng_bootstrap -c tests/config/nextflow.config
tags:
- raxmlng
files:
- path: output/raxmlng/output.raxml.bestTree
contains:
- 'sample1:0.359'
- 'sample2:1.50'
- 'sample3:0.000001'
- 'sample4:0.111'
- path: output/raxmlng/output.raxml.support
contains:
- 'sample1:0.359'
- 'sample2:1.50'
- 'sample3:0.000001'
- 'sample4:0.111'
contains_regex:
- '\)[89]\d:'