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16 lines
586 B
YAML
16 lines
586 B
YAML
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- name: sistr test_sistr
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command: nextflow run tests/modules/sistr -entry test_sistr -c tests/config/nextflow.config
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tags:
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- sistr
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files:
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- path: output/sistr/test-allele.fasta
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md5sum: 144a74999eb9dd01520be5c61e8bd210
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- path: output/sistr/test-allele.json
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md5sum: 3eb993c9489904621f539a93ff9a90ec
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- path: output/sistr/test-cgmlst.csv
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md5sum: c50a2144955fe1b98a6d5792bf295088
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- path: output/sistr/test.tab
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contains: ["cgmlst_ST", "serovar", "matched"]
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- path: output/sistr/versions.yml
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md5sum: 8b852f002c3ce67e3f6498da15b28296
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