nf-core_modules/tests/modules/abacas/test.yml

- name: abacas
  command: nextflow run ./tests/modules/abacas -entry test_abacas -c tests/config/nextflow.config
  tags:
    - abacas
  files:
    - path: output/abacas/test.abacas.bin
    - path: output/abacas/test.abacas.crunch
      md5sum: 9a95358a9bd8ee97d1f2253d95623a17
    - path: output/abacas/test.abacas.fasta
      md5sum: 5e6c403d3850d52f6bde956fa2403b13
    - path: output/abacas/test.abacas.gaps
      md5sum: 5361af445b8d18a85c3af6527a97c89a
    - path: output/abacas/test.abacas.gaps.tab
      md5sum: 193024ec9e5a553573519b218eb06e29
    - path: output/abacas/test.abacas.nucmer.delta
    - path: output/abacas/test.abacas.nucmer.filtered.delta
    - path: output/abacas/test.abacas.nucmer.tiling
      md5sum: 0adaa0ce800d92c149a523d447148d95
    - path: output/abacas/test.abacas.tab
      md5sum: a5b9b452516f519a4201ff809655ef69
    - path: output/abacas/test.abacas.unused.contigs.out
      md5sum: d41d8cd98f00b204e9800998ecf8427e
    - path: output/abacas/test.abacas.MULTIFASTA.fa
      md5sum: 46c899ad70dcef8d14b5829fd8fbab82
Add abacas module (#431) * Add abacas module * Add test for abacas module * Add Harshil to authorship * Updating test with the data uploaded to nf-core/datasets * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-04-12 14:37:08 +00:00			`- name: abacas`
Rename software/ directory to modules/ to re-organise module structure (#567) * Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml 2021-07-07 09:10:18 +00:00			`command: nextflow run ./tests/modules/abacas -entry test_abacas -c tests/config/nextflow.config`
Add abacas module (#431) * Add abacas module * Add test for abacas module * Add Harshil to authorship * Updating test with the data uploaded to nf-core/datasets * Apply suggestions from code review Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> 2021-04-12 14:37:08 +00:00			`tags:`
			`- abacas`
			`files:`
			`- path: output/abacas/test.abacas.bin`
			`- path: output/abacas/test.abacas.crunch`
			`md5sum: 9a95358a9bd8ee97d1f2253d95623a17`
			`- path: output/abacas/test.abacas.fasta`
			`md5sum: 5e6c403d3850d52f6bde956fa2403b13`
			`- path: output/abacas/test.abacas.gaps`
			`md5sum: 5361af445b8d18a85c3af6527a97c89a`
			`- path: output/abacas/test.abacas.gaps.tab`
			`md5sum: 193024ec9e5a553573519b218eb06e29`
			`- path: output/abacas/test.abacas.nucmer.delta`
			`- path: output/abacas/test.abacas.nucmer.filtered.delta`
			`- path: output/abacas/test.abacas.nucmer.tiling`
			`md5sum: 0adaa0ce800d92c149a523d447148d95`
			`- path: output/abacas/test.abacas.tab`
			`md5sum: a5b9b452516f519a4201ff809655ef69`
			`- path: output/abacas/test.abacas.unused.contigs.out`
			`md5sum: d41d8cd98f00b204e9800998ecf8427e`
			`- path: output/abacas/test.abacas.MULTIFASTA.fa`
			`md5sum: 46c899ad70dcef8d14b5829fd8fbab82`