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nf-core_modules/tests/modules/bcftools/annotate/test.yml

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bcftools/annotate follow up corrections (#1359) * bcf annotate ready2go * edited output name * fixed output * updated bcftools ver * changed contain output string * removed contain key entirely * fixed md5sum for test.yml * using match instead of find * bcftools/annotate refactored with complete test * rm trailing white space Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com>
2022-02-28 15:16:29 +00:00
- name: bcftools annotate test_bcftools_annotate_out_vcf
command: nextflow run tests/modules/bcftools/annotate -entry test_bcftools_annotate_out_vcf -c tests/config/nextflow.config
bcftools/annotate ready2go (#1291) * bcf annotate ready2go * edited output name * fixed output * updated bcftools ver * changed contain output string * removed contain key entirely * fixed md5sum for test.yml Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com> Co-authored-by: Sateesh <33637490+sateeshperi@users.noreply.github.com>
2022-02-28 13:23:12 +00:00
tags:
- bcftools/annotate
- bcftools
files:
bcftools/annotate follow up corrections (#1359) * bcf annotate ready2go * edited output name * fixed output * updated bcftools ver * changed contain output string * removed contain key entirely * fixed md5sum for test.yml * using match instead of find * bcftools/annotate refactored with complete test * rm trailing white space Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com>
2022-02-28 15:16:29 +00:00
- path: output/bcftools/test_compressed_vcf_annotated.vcf.gz
bcftools/annotate ready2go (#1291) * bcf annotate ready2go * edited output name * fixed output * updated bcftools ver * changed contain output string * removed contain key entirely * fixed md5sum for test.yml Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com> Co-authored-by: Sateesh <33637490+sateeshperi@users.noreply.github.com>
2022-02-28 13:23:12 +00:00
- path: output/bcftools/versions.yml
Bump tool versions for modules required in viralrecon (#1859) * Bump tool versions for modules required in viralrecon * Fix all the tests * Fix Prettier lint * Remove empty md5sums
2022-07-07 13:48:04 +00:00
md5sum: ff237d88fce62300fdab66b284e9aa95
bcftools/annotate follow up corrections (#1359) * bcf annotate ready2go * edited output name * fixed output * updated bcftools ver * changed contain output string * removed contain key entirely * fixed md5sum for test.yml * using match instead of find * bcftools/annotate refactored with complete test * rm trailing white space Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com>
2022-02-28 15:16:29 +00:00
- name: bcftools annotate test_bcftools_annotate_out_bcf
command: nextflow run tests/modules/bcftools/annotate -entry test_bcftools_annotate_out_bcf -c tests/config/nextflow.config
tags:
- bcftools/annotate
- bcftools
files:
- path: output/bcftools/test_compressed_bcf_annotated.bcf
- path: output/bcftools/versions.yml
Bump tool versions for modules required in viralrecon (#1859) * Bump tool versions for modules required in viralrecon * Fix all the tests * Fix Prettier lint * Remove empty md5sums
2022-07-07 13:48:04 +00:00
md5sum: bbcefb8ebfca05c538a92dbfb94d977e
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