nf-core_modules/tests/modules/umitools/dedup/test.yml

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- name: umitools dedup test_umitools_dedup_no_umi
command: nextflow run tests/modules/umitools/dedup -entry test_umitools_dedup_no_umi -c tests/config/nextflow.config
tags:
- umitools/dedup
- umitools
files:
- path: output/umitools/dedup.bam
md5sum: 53b4edc399db81b87d2343e78af73cf0
- path: output/umitools/dedup_edit_distance.tsv
md5sum: 65186b0964e2f8d970cc04d736d8b119
- path: output/umitools/dedup_per_umi.tsv
md5sum: 8e6783a4a79437b095f095f2aefe7c01
- path: output/umitools/dedup_per_umi_per_position.tsv
md5sum: 9386db4a104b8e4e32f3ca4a84efa4ac
- path: output/umitools/versions.yml
md5sum: 4aaaa33565bcd9a984255139933d6446
- name: umitools dedup test_umitools_dedup_single_end
command: nextflow run tests/modules/umitools/dedup -entry test_umitools_dedup_single_end -c tests/config/nextflow.config
tags:
- umitools
- umitools/dedup
files:
- path: output/bwa/test.bam
md5sum: ea41a3cdca1856b22845e1067fd31f37
- path: output/bwa/versions.yml
md5sum: ce4d987f2c53f4c01b31d210c357b24a
- path: output/samtools/test.bam.bai
md5sum: 095af0ad3921212597ffd7c342ecd5a0
- path: output/samtools/versions.yml
md5sum: 69b7cde627c9b4e8403dfc125db71cc7
- path: output/umitools/dedup.bam
md5sum: d95df177063432748ff33f473910cb1e
- path: output/umitools/versions.yml
md5sum: 730e768dd199d2f5bfb6fd0850446344
- name: umitools dedup test_umitools_dedup_paired_end
command: nextflow run tests/modules/umitools/dedup -entry test_umitools_dedup_paired_end -c tests/config/nextflow.config
tags:
- umitools
- umitools/dedup
files:
- path: output/bwa/test.bam
md5sum: 1ad786cae0ff2254c655e3a206929617
- path: output/bwa/versions.yml
md5sum: b524c5ddf61c20f4a0a93ae8fc78b851
- path: output/samtools/test.bam.bai
md5sum: 7496f4056a8e86327ca93e350f282fc2
- path: output/samtools/versions.yml
md5sum: 72fc2ab934fd4bca0f7f14a705530d34
- path: output/umitools/dedup.bam
md5sum: e8d1eae2aacef76254948c5568e94555
- path: output/umitools/versions.yml
md5sum: fd39e05042d354b3d8de49b617d3183d