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nf-core_modules/tests/software/fastqc/test.yml

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Restructure tests to run individually for each module
2021-02-03 11:02:58 -05:00
- name: fastqc single-end
command: nextflow run ./tests/software/fastqc/ -entry test_fastqc_single_end -c tests/config/nextflow.config
test(fastqc): Add initial pytest-workflow
2020-11-16 10:35:01 -05:00
tags:
- fastqc
Restructure tests to run individually for each module
2021-02-03 11:02:58 -05:00
- fastqc_single_end
test(fastqc): Add expected files and md5sums The md5 sums change for the zip files every run so it's difficult to hit a moving target.
2020-11-16 11:20:29 -05:00
files:
Fix fastqc test
2021-02-03 12:03:30 -05:00
- path: output/fastqc/test_fastqc.html
- path: output/fastqc/test_fastqc.zip
test(fastqc): Use -entry to speed up tests `--wt, --workflow-threads` is now an option and can be used to run tests simultaneously.
2020-11-16 14:41:59 -05:00
Restructure tests to run individually for each module
2021-02-03 11:02:58 -05:00
- name: fastqc paired-end
command: nextflow run ./tests/software/fastqc/ -entry test_fastqc_paired_end -c tests/config/nextflow.config
test(fastqc): Use -entry to speed up tests `--wt, --workflow-threads` is now an option and can be used to run tests simultaneously.
2020-11-16 14:41:59 -05:00
tags:
- fastqc
Restructure tests to run individually for each module
2021-02-03 11:02:58 -05:00
- fastqc_paired_end
test(fastqc): Use -entry to speed up tests `--wt, --workflow-threads` is now an option and can be used to run tests simultaneously.
2020-11-16 14:41:59 -05:00
files:
Fix fastqc test
2021-02-03 12:03:30 -05:00
- path: output/fastqc/test_1_fastqc.html
- path: output/fastqc/test_2_fastqc.html
- path: output/fastqc/test_1_fastqc.zip
- path: output/fastqc/test_2_fastqc.zip
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