diff --git a/modules/ensemblvep/Dockerfile b/modules/ensemblvep/Dockerfile index b4a1c664..4ada7c6b 100644 --- a/modules/ensemblvep/Dockerfile +++ b/modules/ensemblvep/Dockerfile @@ -11,8 +11,8 @@ RUN conda env create -f /environment.yml && conda clean -a # Setup default ARG variables ARG GENOME=GRCh38 ARG SPECIES=homo_sapiens -ARG VEP_VERSION=104 -ARG VEP_TAG=104.3 +ARG VEP_VERSION=105 +ARG VEP_TAG=105.0 # Add conda installation dir to PATH (instead of doing 'conda activate') ENV PATH /opt/conda/envs/nf-core-vep-${VEP_TAG}/bin:$PATH diff --git a/modules/ensemblvep/build.sh b/modules/ensemblvep/build.sh index 650c8704..402f2434 100755 --- a/modules/ensemblvep/build.sh +++ b/modules/ensemblvep/build.sh @@ -20,9 +20,9 @@ build_push() { docker push nfcore/vep:${VEP_TAG}.${GENOME} } -build_push "GRCh37" "homo_sapiens" "104" "104.3" -build_push "GRCh38" "homo_sapiens" "104" "104.3" -build_push "GRCm38" "mus_musculus" "102" "104.3" -build_push "GRCm39" "mus_musculus" "104" "104.3" -build_push "CanFam3.1" "canis_lupus_familiaris" "104" "104.3" -build_push "WBcel235" "caenorhabditis_elegans" "104" "104.3" +build_push "GRCh37" "homo_sapiens" "105" "105.0" +build_push "GRCh38" "homo_sapiens" "105" "105.0" +build_push "GRCm38" "mus_musculus" "102" "105.0" +build_push "GRCm39" "mus_musculus" "105" "105.0" +build_push "CanFam3.1" "canis_lupus_familiaris" "105" "105.0" +build_push "WBcel235" "caenorhabditis_elegans" "105" "105.0" diff --git a/modules/ensemblvep/environment.yml b/modules/ensemblvep/environment.yml index c0731c26..5df85b80 100644 --- a/modules/ensemblvep/environment.yml +++ b/modules/ensemblvep/environment.yml @@ -1,10 +1,10 @@ # You can use this file to create a conda environment for this module: # conda env create -f environment.yml -name: nf-core-vep-104.3 +name: nf-core-vep-105.0 channels: - conda-forge - bioconda - defaults dependencies: - - bioconda::ensembl-vep=104.3 + - bioconda::ensembl-vep=105.0