Update meta for seqret

modules/emboss/seqret/meta.yml

@@ -1,51 +1,50 @@
 name: "emboss_seqret"
-## TODO nf-core: Add a description of the module and list keywords
+description: Reads in one or more sequences and writes them out again
-description: write your description here
 keywords:
-  - sort
+  - emboss
+  - gff
+  - embl
+  - genbank
+  - fasta
+  - convert
+  - swissprot
 tools:
   - "emboss":
-      ## TODO nf-core: Add a description and other details for the software below
       description: "The European Molecular Biology Open Software Suite"
-      homepage: "None"
+      homepage: "https://www.ebi.ac.uk/Tools/sfc/emboss_seqret/"
-      documentation: "None"
+      documentation: "https://emboss.bioinformatics.nl/cgi-bin/emboss/help/seqret"
-      tool_dev_url: "None"
+      tool_dev_url: "http://emboss.open-bio.org/"
-      doi: ""
+      doi: "10.1016/s0168-9525(00)02024-2 "
-      licence: "['GPL']"
+      licence: ["GPL"]
 
-## TODO nf-core: Add a description of all of the variables used as input
 input:
-  # Only when we have meta
   - meta:
       type: map
       description: |
         Groovy Map containing sample information
         e.g. [ id:'test', single_end:false ]
-  # 
+  - sequence:
-  ## TODO nf-core: Delete / customise this example input
-  - bam:
       type: file
-      description: BAM/CRAM/SAM file
+      description: Input sequence query
-      pattern: "*.{bam,cram,sam}"
+      pattern: "*.{gff,em,gb,refseq,pir,swiss,sw,txt}"
+  - out_ext:
+    type: string
+    description: File extension of the output file. Unless otherwise set by a flag in `ext.args`, the extension dictates the output file format.
 
-## TODO nf-core: Add a description of all of the variables used as output
 output:
-  #Only when we have meta
   - meta:
       type: map
       description: |
         Groovy Map containing sample information
         e.g. [ id:'test', single_end:false ]
-  # 
   - versions:
       type: file
       description: File containing software versions
       pattern: "versions.yml"
-  ## TODO nf-core: Delete / customise this example output
+  - outseq:
-  - bam:
       type: file
-      description: Sorted BAM/CRAM/SAM file
+      description: Converted sequence file
-      pattern: "*.{bam,cram,sam}"
+      pattern: "*"
 
 authors:
   - "@MillironX"