From 11cf45043cf61ab88fa02e2f67d83308ca724fe2 Mon Sep 17 00:00:00 2001 From: Matthieu Muffato Date: Mon, 22 Aug 2022 21:01:13 +0100 Subject: [PATCH] Newer container version because the previous one is misconfigured (#1961) The previous one raises the warning > WARNING: Skipping mount /path/to/singularity-v3.9.0/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container Co-authored-by: Harshil Patel --- modules/ucsc/bedtobigbed/main.nf | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/modules/ucsc/bedtobigbed/main.nf b/modules/ucsc/bedtobigbed/main.nf index 80c63817..627315fd 100644 --- a/modules/ucsc/bedtobigbed/main.nf +++ b/modules/ucsc/bedtobigbed/main.nf @@ -5,8 +5,8 @@ process UCSC_BEDTOBIGBED { // WARN: Version information not provided by tool on CLI. Please update version string below when bumping container versions. conda (params.enable_conda ? "bioconda::ucsc-bedtobigbed=377" : null) container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? - 'https://depot.galaxyproject.org/singularity/ucsc-bedtobigbed:377--h446ed27_1' : - 'quay.io/biocontainers/ucsc-bedtobigbed:377--h446ed27_1' }" + 'https://depot.galaxyproject.org/singularity/ucsc-bedtobigbed:377--ha8a8165_3' : + 'quay.io/biocontainers/ucsc-bedtobigbed:377--ha8a8165_3' }" input: tuple val(meta), path(bed)