millironx/nf-core_modules
1
0
Fork 0
mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-11-13 05:13:09 +00:00
Code Issues Releases Packages Activity

Bump Pangolin version to 3.1.20 (#1296)

Browse source 
* Bump Pangolin version to 3.1.20

* Fix md5sum
This commit is contained in:
Harshil Patel 2022-02-15 10:46:20 +00:00 committed by GitHub
parent 967fb22ded
commit 12b0bc5aa9
No known key found for this signature in database
GPG key ID: 4AEE18F83AFDEB23
2 changed files with 4 additions and 4 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

6
modules/pangolin/main.nf
View file

@ -2,10 +2,10 @@ process PANGOLIN {
tag "$meta.id"
label 'process_medium'
conda (params.enable_conda ? 'bioconda::pangolin=3.1.19' : null)
conda (params.enable_conda ? 'bioconda::pangolin=3.1.20' : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/pangolin:3.1.19--pyhdfd78af_0' :
'quay.io/biocontainers/pangolin:3.1.19--pyhdfd78af_0' }"
'https://depot.galaxyproject.org/singularity/pangolin:3.1.20--pyhdfd78af_0' :
'quay.io/biocontainers/pangolin:3.1.20--pyhdfd78af_0' }"
input:
tuple val(meta), path(fasta)

2
tests/modules/pangolin/test.yml
View file

@ -4,4 +4,4 @@
- pangolin
files:
- path: ./output/pangolin/test.pangolin.csv
md5sum: d92ede51bf3886f696f2089e86189125
md5sum: 378f211c219bb644dea63adf7c3254fe