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Fixing lint tests
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3 changed files with 3 additions and 3 deletions
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@ -37,4 +37,4 @@ process SAMTOOLS_MPILEUP {
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$bam
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echo \$(samtools --version 2>&1) | sed 's/^.*samtools //; s/Using.*\$//' > ${software}.version.txt
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"""
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}
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}
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@ -48,7 +48,7 @@ input:
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- fasta-ref:
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type: file
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description: FASTA reference file
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pattern: "*.{fasta,fa}"
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pattern: "*.{fasta,fa}"
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output:
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- meta:
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type: map
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@ -31,4 +31,4 @@ process SAMTOOLS_VIEW {
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samtools view $options.args $bam > ${prefix}.bam
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echo \$(samtools --version 2>&1) | sed 's/^.*samtools //; s/Using.*\$//' > ${software}.version.txt
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"""
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}
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}
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