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Add flagstat test

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This commit is contained in:
drpatelh 2020-08-07 15:32:09 +01:00
parent d6f7bb055b
commit 14480affba
1 changed files with 30 additions and 0 deletions
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30
.github/workflows/samtools_flagstat.yml vendored Normal file
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name: samtools_flagstat
on:
push:
paths:
- software/samtools/flagstat/**
- .github/workflows/samtools_flagstat.yml
- tests
pull_request:
paths:
- software/samtools/flagstat/**
- .github/workflows/samtools_flagstat.yml
- tests
jobs:
ci_test:
runs-on: ubuntu-latest
env:
NXF_ANSI_LOG: false
steps:
- uses: actions/checkout@v2
- name: Install Nextflow
run: |
export NXF_VER="20.07.1"
wget -qO- get.nextflow.io | bash
sudo mv nextflow /usr/local/bin/
# Test the module
- run: nextflow run ./software/samtools/flagstat/test/ -profile docker